DFO 2022 Hidden Markov Model Workshop: |
This tutorial was developed by Marie Auger-Méthé, Vianey Leos Barajas, Ron Togunov, and Marco Antonio Gallegos Herrada for the Department of Fisheries and Oceans, Canada in October 2022. The goal of the workshop is to illustrate the application of hidden Markov models (HMMs) to movement data from marine animals to classify behaviours and identify behaviour-specific habitat associations.
First Annual Meeting of the The CANSSI CRT Project: |
The goal of this tutorial is to explore how to fit hidden Markov models (HMMs) to movement data. To do so, we will investigate a new R package, `momentuHMM`. This package builds on a slightly older package, `moveHMM`, that was developed by Théo Michelot , Roland Langrock, and Toby Patterson, see the associated paper.